برمجيات متوفرة على عزيز
يوفر مركز الحوسبة عالية الأداء عدة برمجيات لمستخدمي نظام عزيز لتمكينهم من إجراء تجاربهم. البرمجيات المثبتة حالياً هي :
القسم |
البرمجيات |
النسخة |
Aeronutics |
su2 |
8.0.0 |
Aeronutics |
su2 |
7.5.1 |
Aeronutics |
su2 |
6.2.0 |
Aeronutics |
parmetis |
4.0.3 |
Aeronutics |
ParaView |
5.3.0 |
Aeronutics |
ParaView |
512 |
Aeronutics |
metis |
5.1.0 |
Aeronutics |
HiFiLESSolver |
0.1 |
Aeronutics |
gsl |
2 |
Aeronutics |
Fieldview |
16 |
Aeronutics |
ansys |
2017 |
Aeronutics |
ansys |
2017 R2 |
Aeronutics |
ansys |
2019 R2 |
Aeronutics |
ansys |
2019 R3 |
Aeronutics |
ansys |
2021 R2 |
Biology |
Rosetta |
3.7 |
Biology |
Rosetta |
3.9 |
Biology |
ants |
2.4.1 |
Chemistry |
xtb |
6.4.1 |
Chemistry |
vmd |
1.9.2 |
Chemistry |
vaspsol |
1 |
Chemistry |
vaspkit |
1.3.4 |
Chemistry |
vasp |
5.4.4 |
Chemistry |
vasp |
5.4.1 |
Chemistry |
orca |
5.0.3 |
Chemistry |
orca |
4.1.0 |
Chemistry |
openmx |
3.9 |
Chemistry |
NX |
2-B17 |
Chemistry |
NX |
1.4.0 |
Chemistry |
NAMD |
3.0b3 |
Chemistry |
NAMD |
2.13 |
Chemistry |
molden |
5.4 |
Chemistry |
molcas |
80 |
Chemistry |
molcas |
78 |
Chemistry |
lammps |
2020.1 |
Chemistry |
lammps |
2022.6 |
Chemistry |
gromacs |
5.1 |
Chemistry |
gromacs |
2022.4 |
Chemistry |
gromacs |
2020 |
Chemistry |
gnuplot |
5.0.1 |
Chemistry |
Gaussian |
9 |
Chemistry |
espresso |
60 |
Chemistry |
espresso |
530 |
Chemistry |
DFTB+ |
r4960 |
Chemistry |
amber |
22 |
Chemistry |
adf |
2014.08 |
Civil |
ogs |
6.0.5 |
FCIT |
gephi |
0.8.2 |
FCIT |
gephi |
0.9.0 |
FCIT |
omnetpp |
5.2.1 |
FCIT |
cycles |
1.2.1 |
FCIT |
FSL |
6.0.6 |
FCIT |
FreeSurfer |
7.2.0 |
FCIT |
FreeSurfer |
7.3.2 |
FCIT |
PyTorch |
2 |
FCIT |
TensorFlow |
2..13.1 |
Generic |
zlib |
1.2.13 |
Generic |
spglib |
1.11 |
Generic |
scala |
2.13.8 |
Generic |
RStudio |
|
Generic |
octave |
4.0.2 |
Generic |
octave |
4.0.0 |
Generic |
nasm |
2.13.01 |
Generic |
maxwell |
3.2 |
Generic |
maxwell |
3.2.1.4 |
Generic |
MATLAB |
R2018a |
Generic |
MATLAB |
R2018b |
Generic |
MATLAB |
R2020b |
Generic |
MATLAB |
R2022b |
Generic |
libxc |
6.0.0 |
Generic |
cudnn |
9 |
Generic |
cudnn |
11.8 |
Generic |
BLAS |
3.6.0 |
Generic |
Hadoop |
2.7.3 |
Generic |
Hadoop |
3.2.0 |
Generic |
Spark |
2.0.2 |
Generic |
Spark |
2.4.0 |
Generic |
FFTW |
3.3.4 |
Generic |
HDF5 |
1.8.14 |
Generic |
HDF5 |
1.12.0 |
Generic |
vtune_amplifier_xe |
2015.2.0.393444 |
Generic |
vtune_amplifier_xe |
2015.1.0.367959 |
Generic |
vtune_amplifier_xe |
2015 |
Generic |
vtune_amplifier_xe |
2013 |
Generic |
parallel_studio_xe |
2015 |
Generic |
mkl |
2017 |
Generic |
itac |
9.0.3 |
Generic |
itac |
9.0.1 |
Generic |
inspector_xe |
2015.1.2.379161 |
Generic |
inspector_xe |
2015.1.0.366509 |
Generic |
inspector_xe |
2015 |
Generic |
inspector_xe |
2013 |
Generic |
impi |
5.0.3 |
Generic |
impi |
5.0.2 |
Generic |
imb |
4.0.2 |
Generic |
imb |
4.0.0 |
Generic |
composer_xe |
2015.2.164 |
Generic |
composer_xe |
2015.1.133 |
Generic |
composer_xe |
2015.0.090 |
Generic |
composer_xe |
2015 |
Generic |
composer_xe |
2013_sp1.2.144 |
Generic |
composer_xe |
2013_sp1 |
Generic |
advisor_xe |
|
Generic |
advisor_xe |
2015.1.0.367266 |
Generic |
advisor_xe |
2015 |
Generic |
advisor_xe |
2013 |
Generic |
impi |
2017u2 |
Generic |
mpich |
3.1.3 |
Generic |
netcdf |
4.7.4 |
Generic |
netcdf |
4.3.3.1 |
Generic |
netcdf |
4.3.2 |
Generic |
netcdf |
3.6.3 |
Generic |
Nividia HPC SDK |
22.7 |
Generic |
oneAPI |
2021 |
Generic |
oneAPI |
2022 |
Generic |
oneAPI |
2023 |
Generic |
OpenMPI |
4.1.4 |
Generic |
OpenMPI |
4.1.2 |
Generic |
OpenMPI |
3.1.6 |
Generic |
OpenMPI |
3.1.5 |
Generic |
OpenMPI |
3.0.0 |
Generic |
OpenMPI |
2.0.4 |
Generic |
OpenMPI |
1.8.5 |
Generic |
xz |
5.4.4 |
Generic |
vscode |
1.76.2 |
Generic |
valgrind |
3.12.0 |
Generic |
ssmtp |
2.61 |
Generic |
scalapack |
2.2.0 |
Generic |
scalapack |
2.1.0 |
Generic |
R |
3.5.0 |
Generic |
OpenBLAS |
0.3.21 |
Generic |
OpenBLAS |
0.2.21 |
Generic |
nss |
3.42 |
Generic |
node |
v18.12.0 |
Generic |
node |
v16.16.0 |
Generic |
NAMD |
2.13 |
Generic |
meld |
1.8.0 |
Generic |
lapack |
3.7.1 |
Generic |
jdk |
9.0.4 |
Generic |
jdk |
8.0_66 |
Generic |
jdk |
17.0.9 |
Generic |
jdk |
11.0.2 |
Generic |
go |
1.21.3 |
Generic |
gcc |
7.1.0 |
Generic |
gcc |
5.3.0 |
Generic |
gcc |
4.9.2 |
Generic |
gcc |
11.3.0 |
Generic |
gcc |
11.1.0 |
Generic |
ferret |
6.6.2 |
Generic |
expat |
2.5.0 |
Generic |
dotnet_sdk |
6.0.413 |
Generic |
dlib |
19.4 |
Generic |
cmake |
3.3.1 |
Generic |
cmake |
3.28.1 |
Generic |
cmake |
3.18.4 |
Generic |
cmake |
3.17.0 |
Generic |
cmake |
3.13.0 |
Generic |
boost |
1.69.0 |
Generic |
boost |
1.63.0 |
Generic |
autoconf |
2.68 |
Generic |
anaconda3 |
2022 |
Genomic |
wgsim |
|
Genomic |
VIP |
|
Genomic |
VelvetOptimiser |
2.2.4 |
Genomic |
velvet_1.2.10 |
1.2.10 |
Genomic |
vcftools_0.1.17b |
0.1.17b |
Genomic |
vcftools_0.1.12b |
0.1.12b |
Genomic |
usearch |
9.2.64 |
Genomic |
Trimmomatic |
0.36 |
Genomic |
tophat |
2.1.1 |
Genomic |
tabtk |
|
Genomic |
tabix |
|
Genomic |
subread |
2.0.6 |
Genomic |
subread |
1.5.0 |
Genomic |
STAR |
2.7.5c |
Genomic |
STAR |
2.5.2b |
Genomic |
sspace_basic |
|
Genomic |
src |
|
Genomic |
sratoolkit |
3.0.7 |
Genomic |
sratoolkit |
2.5.7 |
Genomic |
SPAdes |
3.15.4 |
Genomic |
SPAdes |
3.10.1 |
Genomic |
SnpEff |
5.2a |
Genomic |
snpEff |
4.3 |
Genomic |
snpEff |
|
Genomic |
snap |
|
Genomic |
sickle |
|
Genomic |
seqtk |
|
Genomic |
SeqPrep |
|
Genomic |
samtools |
1.2 |
Genomic |
samtools |
1.18 |
Genomic |
rRNASelector |
|
Genomic |
RepeatMasker |
|
Genomic |
REAPR |
|
Genomic |
rdp_classifier |
2.2 |
Genomic |
quast |
4.5 |
Genomic |
qualimap |
2.2.1 |
Genomic |
qiime |
|
Genomic |
prodigal |
|
Genomic |
prinseqlite |
0.20.4 |
Genomic |
pindel |
|
Genomic |
picrust |
1.1.1 |
Genomic |
Picard-tools |
2.2.1 |
Genomic |
Picard-tools |
1.131 |
Genomic |
pear |
0.9.10 |
Genomic |
PathSeq |
|
Genomic |
pandaseq |
|
Genomic |
Ncbi-blast |
2.3.0 |
Genomic |
mothur |
|
Genomic |
modules |
|
Genomic |
metaphlan |
|
Genomic |
metabat |
|
Genomic |
megahit |
|
Genomic |
megacc |
7 |
Genomic |
manta |
1.6.0 |
Genomic |
mafft |
7.49 |
Genomic |
lefse |
|
Genomic |
Lastz-distrib |
1.02.00 |
Genomic |
last |
737 |
Genomic |
KronaTools |
2.7 |
Genomic |
krakenuniq |
|
Genomic |
kraken2 |
|
Genomic |
kraken |
|
Genomic |
kallisto |
|
Genomic |
kaiju |
|
Genomic |
jellyfish |
|
Genomic |
htslib |
1.3 |
Genomic |
htslib |
1.18 |
Genomic |
htslib |
|
Genomic |
HTSeq |
0.6.1 |
Genomic |
hmmer |
3.1 |
Genomic |
gqt |
|
Genomic |
gm_et |
|
Genomic |
GATK-Cluster |
|
Genomic |
gatk |
4.4.0.0 |
Genomic |
gatk |
4.2.2.0 |
Genomic |
gatk |
4.1.8.1 |
Genomic |
GATK |
4.1.4 |
Genomic |
GATK |
3.8 |
Genomic |
GapFiller |
|
Genomic |
freebayes |
|
Genomic |
flexbar |
2.5 |
Genomic |
flex |
2.5.39 |
Genomic |
fastx_toolkit |
|
Genomic |
FastQC |
0.12.0 |
Genomic |
FastQC |
|
Genomic |
fastp |
0.23.4 |
Genomic |
EMBOSS |
|
Genomic |
EGADownloadClient |
2.2.2 |
Genomic |
edirect |
|
Genomic |
dragmap |
1.2.1 |
Genomic |
dragmap |
1.2 |
Genomic |
dock |
6.9 |
Genomic |
deconseq |
0.4.3 |
Genomic |
cutadapt |
|
Genomic |
cufflinks |
2.2.1 |
Genomic |
CLARKSC |
1.2.4 |
Genomic |
cdhit |
|
Genomic |
Bwa-mem |
2.2.1 |
Genomic |
bwa |
0.7.17 |
Genomic |
bwa |
0.7.12 |
Genomic |
bowtie2 |
2.2.9 |
Genomic |
bowtie2 |
2.2.9 |
Genomic |
bowtie2 |
2.2.8 |
Genomic |
bowtie |
1.2.2 |
Genomic |
bowtie |
1.1.2 |
Genomic |
bioawk |
|
Genomic |
bedtools |
2.29.1 |
Genomic |
bedtools2 |
|
Genomic |
bedops |
2.4.15 |
Genomic |
bcl2fastq |
|
Genomic |
bcftools |
1.3 |
Genomic |
bcftools |
1.18 |
Genomic |
bcftools |
1.12 |
Genomic |
bbmap |
|
Genomic |
Autodock-vina |
1.1.2 |
Genomic |
augustus |
3.2.1 |
Genomic |
annovar |
2020 |
Genomic |
AnnotSV |
3.3.6 |
GeoSience |
ModEM3D |
1.1.0 |
Maritime |
nco |
5.0.3 |
Nuclear |
gate |
8.1 |
Nuclear |
root |
6.14.06 |
Nuclear |
geant4 |
10.04 |
Pharma |
Gromacs |
2023 |
Pharma |
gromacs |
2023.3 |
Pharma |
gromacs |
2022.4 |
Pharma |
gromacs |
2019.6 |
Pharma |
gromacs |
2019 |
Pharma |
gromacs |
2018 |
Physics |
wien2k |
23.2 |
Physics |
siesta |
4.1.5 |
Physics |
siesta |
4.1 |
Physics |
shengbte |
1.1 |
Physics |
quantum espresso |
7.3 |
Physics |
quantum espresso |
7.1 |
Physics |
quantum espresso |
7 |
Physics |
quantum espresso |
6.7 |
Physics |
quantum espresso |
6.4.1 |
Physics |
quantum espresso |
6.3 |
Physics |
geant4 |
11.1.3 |
Physics |
geant4 |
10.3.2 |
Physics |
gamess |
2021 R2 Patch 1 |
Physics |
feff10 |
10.0.0 |
Physics |
boltztrap |
1.2.5 |
Physics |
bader |
1.04 |
Physics |
alamode |
1.1.0 |
Physics |
abinit |
8.6.3 |
Physics |
abinit |
7.10.5 |
|
آخر تحديث
12/26/2024 12:59:06 PM
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